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Result File Description

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- Result File Description

Result File Description
Deliverables List

File Type | File Name | Description
[Sample name]_[read1].fastq.gz | Raw read1 sequence data
[Sample name]_[read2].fastq.gz | Raw read2 sequence data
md5sum | [Order#]_[#samples]_md5sum_[DownloadLink].txt | You can download this file by clicking on the "md5sum List" button found on the "Download List" page. The file is slightly different in terms content, depending on how you’re receiving your data. If you’re receiving via download link, the file contains the following information : File name, File size, md5sum, FTP link. Otherwise, if you're receiving your data via HDD the file only contains : File name, File size, and md5sum. MD5 is a string of 32 hexadecimal values, which represents a 'fingerprint' of a file. By comparing the supplied MD5 value to the actual value computed by the MD5sums utility, you can make sure that the file that you downloaded off of the internet has not been tampered with or modified from the original file stored in our server.

FASTQ Format
Phred Quality Score

Phred quality score numerically expresses the accuracy of each nucleotide. Higher Q number signifies higher accuracy.
For example, if Phred assigns a quality score of 30 to a base, the chances of having base call error are 1 in 1000.
Phred Quality Score Q is calculated with -10log10(P), where p is probability of erroneous base call.

Quality of phred score | Probability of incorrect base call | Base call accuracy
10 | 1 in 10 | 90%
20 | 1 in 100 | 99%
30 | 1 in 1000 | 99.9%
40 | 1 in 10000 | 99.99%

Order Information

Order Number

Company location

Macrogen Gangnam HQ
Business & Support Center
Macrogen Bldg, 238, Teheran-ro, Gangnam-gu, Seoul, Republic of Korea Tel: +82-2-2180-7000 Web : https://www.macrogen.com LIMS : http://dna.macrogen.com
Macrogen Genome Center
Laboratory, IT and Business
[08511] 1001, 10F, 254, Beotkkot-ro, Geumcheon-gu, Seoul, Republic of Korea (Gasan-dong, World Meridian 1) Tel: +82-2-2180-7000 Email1: ngs@macrogen.com(Overseas) Email2: ngskr@macrogen.com (Republic of Korea) Web : https://www.macrogen.com LIMS : http://dna.macrogen.com

Psomagen (Macrogen USA)
Laboratory, Business & Support Center
1330 Piccard Drive, Suite 103, Rockville, MD 20850, United States T. +1-301-251-1007 Email : inquiry@psomagen.com Web : https://psomagen.com
Macrogen Japan
Laboratory, Business & Support Center
16F Time24 Building, 2-4-32 Aomi, Koto-ku, Tokyo 135-0064 JAPAN T. +81-3-5962-1124 E. ngs@macrogen-japan.co.jp
Macrogen Singapore
Laboratory, Business & Support Center
3 Biopolis Drive #05-18, Synapse, Singapore 138623 T. +65-6339-0927 Email : info-sg@macrogen.com
Macrogen Europe
Laboratory, Business & Support Center
Meibergdreef 57, 1105 BA, Amsterdam, the Netherlands T. +31-20-333-7563 Email : ngs@macrogen.eu

Macrogen Spain
Laboratory, Business & Support Center
Av. Sur del Aeropuerto de Barajas, 28, Office B-2, 28042 Madrid, Spain T. +34-911-138-378 Email : info-spain@macrogen.com
Macrogen Belgium
Laboratory, Business & Support Center
Oxfordlaan 70, 6229 EV Maastricht, Netherlands Tel: +31-20-333-7563 Email : info.be@macrogen.eu
Macrogen Italy
Viale Ortles, 22/4, 20139 Milano, MI, Italy Tel: +39-02-5666-0274 Email : italy@macrogen-europe.com

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