# Diversity analysis

### (Beta diversity > Distance Matrix)

#### Distance Matrix - Bray Curtis

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Heatmap based on the matrix of Bray-Curtis distances between samples.
Gower, J. C. (1966). Some distance properties of latent root and vector methods used in multivariate analysis. Biometrika, 53(3-4), 325-338.
Bray, J. R., and J. T. Curtis. (1957). An ordination of the upland forest communities of southern Wisconsin. Ecological Monographs 27:325–349.

#### Distance Matrix - Weighted UniFrac

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Heatmap based on the matrix of Weighted UniFrac distances between samples.
Gower, J. C. (1966). Some distance properties of latent root and vector methods used in multivariate analysis. Biometrika, 53(3-4), 325-338.
Lozupone, C., Lladser, M. E., Knights, D., Stombaugh, J., & Knight, R. (2011). UniFrac: an effective distance metric for microbial community comparison. The ISME journal, 5(2), 169-172.

#### Distance Matrix - Unweighted UniFrac

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Heatmap based on the matrix of Unweighted UniFrac distances between samples.
Gower, J. C. (1966). Some distance properties of latent root and vector methods used in multivariate analysis. Biometrika, 53(3-4), 325-338.
Lozupone, C., Lladser, M. E., Knights, D., Stombaugh, J., & Knight, R. (2011). UniFrac: an effective distance metric for microbial community comparison. The ISME journal, 5(2), 169-172.